[cosmoMC] - minor problem with the current master branch
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Ira *Wolfson
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by Ira *Wolfson » June 26 2017
Hi,
I have encountered a minor problem with the master branch code.
I am running cosmomc with the attached .ini file.
freeNS.ini
I get the following error:
Code: Select all
forrtl: severe (173): A pointer passed to DEALLOCATE points to an object that cannot be deallocated
The reason this is minor, is that I can still run it again (having set checkpoint=T) and the run will converge eventually.
However it is worth taking a look at...
-- Ira
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Ira *Wolfson
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by Ira *Wolfson » June 26 2017
Spoke to soon...
The fault persists.
However, so far using cosmomc_debug it does not break.
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Ira *Wolfson
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by Ira *Wolfson » June 26 2017
here it is
Code: Select all
forrtl: severe (173): A pointer passed to DEALLOCATE points to an object that cannot be deallocated
Image PC Routine Line Source
cosmomc_debug 0000000000BA5502 Unknown Unknown Unknown
cosmomc_debug 0000000000467915 objectlists_mp_fr 274 ObjectLists.f90
cosmomc_debug 0000000000474812 objectlists_mp_th 496 ObjectLists.f90
cosmomc_debug 0000000000688D9B samplecollector_m 302 SampleCollector.f90
cosmomc_debug 000000000068F601 samplecollector_m 446 SampleCollector.f90
cosmomc_debug 000000000064947B montecarlo_mp_tch 148 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007F47F9F76F45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007FA79FAA4330 Unknown Unknown Unknown
cosmomc_debug 0000000000AE86A1 cambmain_mp_calcs 2177 cmbmain.f90
cosmomc_debug 0000000000A93E12 cambmain_mp_cltra 302 cmbmain.f90
cosmomc_debug 0000000000B15461 camb_mp_camb_tran 96 camb.f90
cosmomc_debug 00000000006D8AA1 calculator_camb_m 221 Calculator_CAMB.f90
cosmomc_debug 00000000006CF9E3 calclike_cosmolog 81 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007FA79F3E6F45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007F26C4225330 Unknown Unknown Unknown
cosmomc_debug 0000000000970D0E massivenu_mp_nu_r 1661 modules.f90
cosmomc_debug 00000000009AECB9 dtauda_ 243 equations_ppf.f90
cosmomc_debug 000000000092ABE1 rombint_ 148 subroutines.f90
cosmomc_debug 0000000000945F51 modelparams_mp_de 529 modules.f90
cosmomc_debug 0000000000946044 modelparams_mp_ti 538 modules.f90
cosmomc_debug 0000000000AA4DAE cambmain_mp_initv 783 cmbmain.f90
cosmomc_debug 0000000000A9196D cambmain_mp_cmbma 157 cmbmain.f90
cosmomc_debug 0000000000B156DB camb_mp_camb_getr 137 camb.f90
cosmomc_debug 0000000000B14F6C camb_mp_camb_gett 46 camb.f90
cosmomc_debug 00000000006D7B19 calculator_camb_m 191 Calculator_CAMB.f90
cosmomc_debug 00000000006CF3FB calclike_cosmolog 77 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007F26C3B67F45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007F98B6F29330 Unknown Unknown Unknown
cosmomc_debug 0000000000AE65CD cambmain_mp_calcs 2174 cmbmain.f90
cosmomc_debug 0000000000A93E12 cambmain_mp_cltra 302 cmbmain.f90
cosmomc_debug 0000000000B15461 camb_mp_camb_tran 96 camb.f90
cosmomc_debug 00000000006D8AA1 calculator_camb_m 221 Calculator_CAMB.f90
cosmomc_debug 00000000006CF9E3 calclike_cosmolog 81 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007F98B686BF45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007FEC51A95330 Unknown Unknown Unknown
cosmomc_debug 0000000000AE2A7D cambmain_mp_calcs 2147 cmbmain.f90
cosmomc_debug 0000000000A93E12 cambmain_mp_cltra 302 cmbmain.f90
cosmomc_debug 0000000000B15461 camb_mp_camb_tran 96 camb.f90
cosmomc_debug 00000000006D8AA1 calculator_camb_m 221 Calculator_CAMB.f90
cosmomc_debug 00000000006CF9E3 calclike_cosmolog 81 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007FEC513D7F45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007F83623AA330 Unknown Unknown Unknown
cosmomc_debug 0000000000ADFF5D cambmain_mp_calcs 2141 cmbmain.f90
cosmomc_debug 0000000000A93E12 cambmain_mp_cltra 302 cmbmain.f90
cosmomc_debug 0000000000B15461 camb_mp_camb_tran 96 camb.f90
cosmomc_debug 00000000006D8AA1 calculator_camb_m 221 Calculator_CAMB.f90
cosmomc_debug 00000000006CF9E3 calclike_cosmolog 81 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007F8361CECF45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007FC35E3F6330 Unknown Unknown Unknown
cosmomc_debug 0000000000AE8133 cambmain_mp_calcs 2176 cmbmain.f90
cosmomc_debug 0000000000A93E12 cambmain_mp_cltra 302 cmbmain.f90
cosmomc_debug 0000000000B15461 camb_mp_camb_tran 96 camb.f90
cosmomc_debug 00000000006D8AA1 calculator_camb_m 221 Calculator_CAMB.f90
cosmomc_debug 00000000006CF9E3 calclike_cosmolog 81 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007FC35DD38F45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line Source
cosmomc_debug 0000000000C8E245 Unknown Unknown Unknown
cosmomc_debug 0000000000C8BE67 Unknown Unknown Unknown
cosmomc_debug 0000000000C2ED24 Unknown Unknown Unknown
cosmomc_debug 0000000000C2EB36 Unknown Unknown Unknown
cosmomc_debug 0000000000BB53A9 Unknown Unknown Unknown
cosmomc_debug 0000000000BBE4BE Unknown Unknown Unknown
libpthread.so.0 00007F23ECC10330 Unknown Unknown Unknown
cosmomc_debug 0000000000AE1B1D cambmain_mp_calcs 2146 cmbmain.f90
cosmomc_debug 0000000000A93E12 cambmain_mp_cltra 302 cmbmain.f90
cosmomc_debug 0000000000B15461 camb_mp_camb_tran 96 camb.f90
cosmomc_debug 00000000006D8AA1 calculator_camb_m 221 Calculator_CAMB.f90
cosmomc_debug 00000000006CF9E3 calclike_cosmolog 81 CalcLike_Cosmology.f90
cosmomc_debug 00000000008D63C8 calclike_mp_theor 308 calclike.f90
cosmomc_debug 00000000008CEA35 calclike_mp_getlo 146 calclike.f90
cosmomc_debug 0000000000647FD5 montecarlo_mp_tsa 94 MCMC.f90
cosmomc_debug 0000000000650939 montecarlo_mp_tfa 369 MCMC.f90
cosmomc_debug 00000000006490C0 montecarlo_mp_tch 144 MCMC.f90
cosmomc_debug 000000000069DB4F generalsetup_mp_t 137 GeneralSetup.f90
cosmomc_debug 00000000008ED9B0 MAIN__ 268 driver.F90
cosmomc_debug 0000000000410A5E Unknown Unknown Unknown
libc.so.6 00007F23EC552F45 Unknown Unknown Unknown
cosmomc_debug 0000000000410969 Unknown Unknown Unknown
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Ira *Wolfson
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by Ira *Wolfson » June 26 2017
Pulled on 4/6/2017
I am using ubuntu 14.04 X 16.2 compiler,
since I couldn't make ubuntu 16.04 X 17.4 compiler run at all... :(
I could try running on Nov16 version before those changes were made...
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Antony Lewis
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by Antony Lewis » June 26 2017
Could be a problem with the "thin" routine. Don't you already have enough samples? (500,000!)
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Ira *Wolfson
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by Ira *Wolfson » June 26 2017
Yes, I have over 500,000 samples.
And the convergence statistic is at ~ 0.02.
However, am I right in saying that since the code did not converge on its own,
the ends of the Gaussian might not be well behaved?
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Antony Lewis
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by Antony Lewis » June 26 2017
0.02 is usually plenty good enough.